Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain AM43-4BH |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1506264 bp
Thymine Count
1483148 bp
Guanine Count
1054015 bp
Cytosine Count
1111250 bp
Genome Length
5155765 bp
Protein-coding Genes
4166 genes
Non-Coding Genes
121 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| abc transporter atp-binding protein | DW935_13040 | Not Available | Positive | 3030944 - 3032398 | 54508.0 |
| abc transporter permease | DW935_13045 | Not Available | Positive | 3032422 - 3033528 | 41435.5 |
| abc transporter permease | DW935_13050 | Not Available | Positive | 3033541 - 3034647 | 41634.3 |
| transaldolase | DW935_13055 | Not Available | Positive | 3034744 - 3035400 | 23527.5 |
| arac family transcriptional regulator | DW935_13060 | Not Available | Positive | 3035552 - 3036475 | 36234.9 |
| hypothetical protein | DW935_13065 | Not Available | Negative | 3036550 - 3037377 | 31907.4 |
| penicillin-binding protein | DW935_13070 | Not Available | Negative | 3037584 - 3039911 | 88345.2 |
| aspartate carbamoyltransferase | DW935_13075 | Not Available | Positive | 3040072 - 3041013 | 36259.7 |
| aspartate carbamoyltransferase regulatory subunit | DW935_13080 | Not Available | Positive | 3041022 - 3041489 | 17408.3 |
| flavin reductase family protein | DW935_13085 | Not Available | Positive | 3041495 - 3042082 | 21914.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

