Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain AM43-4BH |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1506264 bp
Thymine Count
1483148 bp
Guanine Count
1054015 bp
Cytosine Count
1111250 bp
Genome Length
5155765 bp
Protein-coding Genes
4166 genes
Non-Coding Genes
121 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| amp nucleosidase | DW935_12940 | Not Available | Negative | 3011991 - 3012767 | 29142.2 |
| hypothetical protein | DW935_12945 | Not Available | Positive | 3012825 - 3013274 | 17607.4 |
| hypothetical protein | DW935_12950 | Not Available | Negative | 3013375 - 3014166 | 30517.8 |
| nif3-like dinuclear metal center hexameric protein | DW935_12955 | Not Available | Negative | 3014175 - 3015269 | 40621.9 |
| hypothetical protein | DW935_12960 | Not Available | Negative | 3015331 - 3015609 | 10839.2 |
| abc transporter permease | DW935_12965 | Not Available | Negative | 3015668 - 3016465 | 29543.7 |
| atp-binding cassette domain-containing protein | DW935_12970 | Not Available | Negative | 3016474 - 3017142 | 24500.8 |
| proline--trna ligase | DW935_12975 | Not Available | Negative | 3017177 - 3018667 | 56833.0 |
| hypothetical protein | DW935_12980 | Not Available | Negative | 3018782 - 3019933 | 44031.7 |
| 1,4-alpha-glucan-branching enzyme | DW935_12985 | Not Available | Negative | 3019937 - 3021964 | 78102.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

