Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain AM43-4BH |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1506264 bp
Thymine Count
1483148 bp
Guanine Count
1054015 bp
Cytosine Count
1111250 bp
Genome Length
5155765 bp
Protein-coding Genes
4166 genes
Non-Coding Genes
121 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| Trna-arg | Not Available | Not Available | Positive | 3002667 - 3002743 | Not Available |
| Trna-arg | Not Available | Not Available | Positive | 3002761 - 3002837 | Not Available |
| Trna-arg | Not Available | Not Available | Positive | 3003062 - 3003138 | Not Available |
| 4-hydroxy-tetrahydrodipicolinate synthase | DW935_12900 | Not Available | Negative | 3003485 - 3004378 | 32789.2 |
| dna ligase (nad(+)) liga | DW935_12905 | Not Available | Negative | 3004480 - 3006477 | 75145.7 |
| trna (guanosine(37)-n1)-methyltransferase trmd | DW935_12910 | Not Available | Positive | 3006576 - 3007250 | 25441.7 |
| dihydroorotate dehydrogenase | DW935_12915 | Not Available | Negative | 3007616 - 3008527 | 32363.4 |
| dihydroorotate dehydrogenase electron transfer subunit | DW935_12920 | Not Available | Negative | 3008515 - 3009294 | 28483.2 |
| xre family transcriptional regulator | DW935_12925 | Not Available | Negative | 3009388 - 3009840 | 17319.5 |
| dna polymerase iii subunit delta | DW935_12935 | Not Available | Negative | 3010963 - 3011979 | 38857.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

