Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain AM43-4BH |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1506264 bp
Thymine Count
1483148 bp
Guanine Count
1054015 bp
Cytosine Count
1111250 bp
Genome Length
5155765 bp
Protein-coding Genes
4166 genes
Non-Coding Genes
121 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| pdz domain-containing protein | DW935_12835 | Not Available | Positive | 2984548 - 2986242 | 63106.7 |
| hypothetical protein | DW935_12840 | Not Available | Negative | 2986308 - 2988605 | 87917.0 |
| sensor histidine kinase | DW935_12845 | Not Available | Positive | 2988727 - 2990112 | 53356.8 |
| dna-binding response regulator | DW935_12850 | Not Available | Positive | 2990137 - 2990838 | 26528.4 |
| hypothetical protein | DW935_12855 | Not Available | Negative | 2991159 - 2992376 | 45922.7 |
| dna gyrase subunit a | DW935_12860 | Not Available | Negative | 2992407 - 2994974 | 96391.0 |
| atp-dependent clp protease atp-binding subunit | DW935_12865 | Not Available | Positive | 2995339 - 2997855 | 93876.9 |
| molecular chaperone htpg | DW935_12870 | Not Available | Positive | 2997990 - 3000035 | 78183.2 |
| patatin | DW935_12875 | Not Available | Positive | 3000165 - 3002474 | 87727.7 |
| Trna-arg | Not Available | Not Available | Positive | 3002564 - 3002640 | Not Available |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

