Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain AM43-4BH |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1506264 bp
Thymine Count
1483148 bp
Guanine Count
1054015 bp
Cytosine Count
1111250 bp
Genome Length
5155765 bp
Protein-coding Genes
4166 genes
Non-Coding Genes
121 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| glycoside hydrolase family 92 protein | DW935_12785 | Not Available | Negative | 2967374 - 2969707 | 88710.1 |
| glycerophosphodiester phosphodiesterase | DW935_12790 | Not Available | Negative | 2969727 - 2970539 | 30989.0 |
| ragb/susd family nutrient uptake outer membrane protein | DW935_12795 | Not Available | Negative | 2970613 - 2972253 | 61732.4 |
| tonb-dependent receptor | DW935_12800 | Not Available | Negative | 2972274 - 2975297 | 111949.0 |
| duf1624 domain-containing protein | DW935_12805 | Not Available | Negative | 2975373 - 2976491 | 41642.0 |
| alpha-n-acetylglucosaminidase | DW935_12810 | Not Available | Negative | 2976499 - 2978763 | 87178.9 |
| hybrid sensor histidine kinase/response regulator | DW935_12815 | Not Available | Negative | 2978846 - 2983012 | 160345.0 |
| Trna-asn | Not Available | Not Available | Positive | 2983206 - 2983279 | Not Available |
| Trna-asn | Not Available | Not Available | Positive | 2983305 - 2983378 | Not Available |
| adenosine kinase | DW935_12830 | Not Available | Positive | 2983518 - 2984504 | 35254.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

