Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain AM43-4BH |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1506264 bp
Thymine Count
1483148 bp
Guanine Count
1054015 bp
Cytosine Count
1111250 bp
Genome Length
5155765 bp
Protein-coding Genes
4166 genes
Non-Coding Genes
121 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | DW935_12665 | Not Available | Positive | 2933692 - 2933877 | 7251.59 |
| hypothetical protein | DW935_12670 | Not Available | Positive | 2933837 - 2934490 | 25607.5 |
| duf3871 family protein | DW935_12680 | Not Available | Positive | 2934968 - 2935987 | 38719.3 |
| dna repair protein | DW935_12685 | Not Available | Positive | 2936075 - 2936521 | 16652.9 |
| site-specific integrase | DW935_12690 | Not Available | Positive | 2936672 - 2937259 | 22634.9 |
| hypothetical protein | DW935_12700 | Not Available | Positive | 2938591 - 2939799 | 46348.0 |
| tonb-dependent receptor | DW935_12705 | Not Available | Positive | 2940216 - 2942516 | 86515.3 |
| duf4374 domain-containing protein | DW935_12710 | Not Available | Positive | 2942574 - 2943974 | 51067.5 |
| pepsy domain-containing protein | DW935_12715 | Not Available | Positive | 2943991 - 2945187 | 45484.8 |
| magnesium transporter cora family protein | DW935_12720 | Not Available | Negative | 2945281 - 2946204 | 35626.5 |
Pathways
216 pathways
Health Effects
No health effects information available for this bacterium.

