Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain AM43-4BH |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1506264 bp
Thymine Count
1483148 bp
Guanine Count
1054015 bp
Cytosine Count
1111250 bp
Genome Length
5155765 bp
Protein-coding Genes
4166 genes
Non-Coding Genes
121 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| recombinase | DW935_00820 | Not Available | Negative | 171481 - 172938 | 55477.1 |
| marr family transcriptional regulator | DW935_00825 | Not Available | Negative | 173145 - 174011 | 32689.1 |
| hypothetical protein | DW935_00830 | Not Available | Negative | 174030 - 174587 | 21224.4 |
| hypothetical protein | DW935_00835 | Not Available | Negative | 174584 - 174955 | 14750.0 |
| hypothetical protein | DW935_00840 | Not Available | Negative | 174990 - 175442 | 17525.0 |
| hypothetical protein | DW935_00845 | Not Available | Negative | 175454 - 176503 | 40610.9 |
| recombinase family protein | DW935_00850 | Not Available | Positive | 176739 - 177383 | 24309.1 |
| hypothetical protein | DW935_00855 | Not Available | Positive | 177647 - 177802 | 6327.86 |
| hypothetical protein | DW935_00860 | Not Available | Negative | 177752 - 178432 | 26405.8 |
| hypothetical protein | DW935_00870 | Not Available | Negative | 178904 - 179158 | 10115.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

