Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain AM43-4BH |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1506264 bp
Thymine Count
1483148 bp
Guanine Count
1054015 bp
Cytosine Count
1111250 bp
Genome Length
5155765 bp
Protein-coding Genes
4166 genes
Non-Coding Genes
121 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| arac family transcriptional regulator | DW935_12560 | Not Available | Positive | 2910729 - 2911628 | 35622.9 |
| arac family transcriptional regulator | DW935_12565 | Not Available | Positive | 2911888 - 2912547 | 25862.6 |
| plasmid mobilization relaxosome protein mobc | DW935_12570 | Not Available | Negative | 2912569 - 2913516 | 35741.1 |
| plasmid mobilization relaxosome protein mobc | DW935_12575 | Not Available | Negative | 2913513 - 2913878 | 13955.8 |
| dna primase | DW935_12580 | Not Available | Negative | 2914055 - 2914993 | 35534.8 |
| helicase | DW935_12585 | Not Available | Negative | 2915251 - 2916456 | 47369.8 |
| hypothetical protein | DW935_12590 | Not Available | Negative | 2916734 - 2917123 | 14880.9 |
| site-specific integrase | DW935_12595 | Not Available | Negative | 2917120 - 2918343 | 46744.0 |
| hypothetical protein | DW935_12600 | Not Available | Positive | 2918660 - 2918974 | 12006.2 |
| hypothetical protein | DW935_12605 | Not Available | Positive | 2919019 - 2919228 | 7782.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

