Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain AM43-4BH |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1506264 bp
Thymine Count
1483148 bp
Guanine Count
1054015 bp
Cytosine Count
1111250 bp
Genome Length
5155765 bp
Protein-coding Genes
4166 genes
Non-Coding Genes
121 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | DW935_12295 | Not Available | Negative | 2834576 - 2835790 | 45661.3 |
| gamma-carboxymuconolactone decarboxylase | DW935_12300 | Not Available | Negative | 2835925 - 2836755 | 31013.8 |
| beta-hexosaminidase | DW935_12305 | Not Available | Negative | 2836989 - 2839412 | 91049.5 |
| duf1624 domain-containing protein | DW935_12310 | Not Available | Positive | 2839613 - 2840704 | 40470.6 |
| rna polymerase sigma-70 factor | DW935_12315 | Not Available | Positive | 2840729 - 2841289 | 21971.5 |
| hypothetical protein | DW935_12320 | Not Available | Negative | 2841348 - 2842709 | 49038.1 |
| mate family efflux transporter | DW935_12325 | Not Available | Positive | 2843050 - 2844372 | 48758.5 |
| signal recognition particle protein | DW935_12330 | Not Available | Positive | 2844471 - 2845793 | 48854.7 |
| bifunctional methylenetetrahydrofolate dehydrogenase/methenyltetrahydrofolate cyclohydrolase fold | DW935_12335 | Not Available | Positive | 2845907 - 2846788 | 31535.7 |
| capa family protein | DW935_12340 | Not Available | Positive | 2847727 - 2848800 | 40856.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

