Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain AM43-4BH |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1506264 bp
Thymine Count
1483148 bp
Guanine Count
1054015 bp
Cytosine Count
1111250 bp
Genome Length
5155765 bp
Protein-coding Genes
4166 genes
Non-Coding Genes
121 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | DW935_12185 | Not Available | Negative | 2803516 - 2803722 | 7749.52 |
| ompa family protein | DW935_12190 | Not Available | Negative | 2804319 - 2805509 | 45001.5 |
| hypothetical protein | DW935_12195 | Not Available | Negative | 2805514 - 2808312 | 104420.0 |
| helix-turn-helix domain-containing protein | DW935_12200 | Not Available | Negative | 2808833 - 2809741 | 35494.1 |
| hypothetical protein | DW935_12205 | Not Available | Negative | 2809809 - 2810090 | 10793.6 |
| hypothetical protein | DW935_12210 | Not Available | Negative | 2810087 - 2810320 | 9045.06 |
| hypothetical protein | DW935_12215 | Not Available | Positive | 2810554 - 2811021 | 16027.4 |
| hypothetical protein | DW935_12220 | Not Available | Positive | 2811023 - 2811685 | 24838.4 |
| tonb-dependent receptor | DW935_12225 | Not Available | Positive | 2811699 - 2813855 | 81336.9 |
| cobaltochelatase subunit cobn | DW935_12230 | Not Available | Positive | 2813902 - 2818377 | 166170.0 |
Pathways
216 pathways
Health Effects
No health effects information available for this bacterium.

