Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain AM43-4BH |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1506264 bp
Thymine Count
1483148 bp
Guanine Count
1054015 bp
Cytosine Count
1111250 bp
Genome Length
5155765 bp
Protein-coding Genes
4166 genes
Non-Coding Genes
121 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| conjugal transfer protein trag | DW935_12080 | Not Available | Positive | 2785017 - 2787026 | 76995.6 |
| nucleotidyl transferase abieii/abigii toxin family protein | DW935_12085 | Not Available | Negative | 2787069 - 2788085 | 38623.8 |
| hypothetical protein | DW935_12090 | Not Available | Negative | 2788095 - 2788796 | 26749.5 |
| duf3945 domain-containing protein | DW935_12100 | Not Available | Positive | 2789243 - 2790565 | 49088.9 |
| type ia dna topoisomerase | DW935_12105 | Not Available | Positive | 2790592 - 2792679 | 76482.2 |
| dihydrofolate reductase | DW935_12110 | Not Available | Negative | 2792776 - 2793294 | 18940.7 |
| hypothetical protein | DW935_12115 | Not Available | Negative | 2793429 - 2793671 | 8887.91 |
| bifunctional dna primase/helicase | DW935_12120 | Not Available | Negative | 2793701 - 2795773 | 77900.6 |
| dna-binding protein | DW935_12125 | Not Available | Negative | 2795736 - 2796095 | 14308.2 |
| hypothetical protein | DW935_12130 | Not Available | Negative | 2796200 - 2797102 | 35746.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

