Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain AM43-4BH |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1506264 bp
Thymine Count
1483148 bp
Guanine Count
1054015 bp
Cytosine Count
1111250 bp
Genome Length
5155765 bp
Protein-coding Genes
4166 genes
Non-Coding Genes
121 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| duf3876 domain-containing protein | DW935_12030 | Not Available | Negative | 2777217 - 2777567 | 13339.0 |
| trag family conjugative transposon atpase | DW935_12035 | Not Available | Negative | 2777579 - 2780092 | 96349.5 |
| duf4133 domain-containing protein | DW935_12040 | Not Available | Negative | 2780089 - 2780424 | 12827.2 |
| duf4134 domain-containing protein | DW935_12045 | Not Available | Negative | 2780435 - 2780731 | 10202.5 |
| hypothetical protein | DW935_12050 | Not Available | Negative | 2780902 - 2781564 | 23557.7 |
| duf3408 domain-containing protein | DW935_12055 | Not Available | Negative | 2781567 - 2781968 | 15393.2 |
| para family protein | DW935_12060 | Not Available | Negative | 2781970 - 2782752 | 29242.3 |
| hypothetical protein | DW935_12065 | Not Available | Positive | 2782977 - 2783186 | 7775.57 |
| hypothetical protein | DW935_12070 | Not Available | Positive | 2783322 - 2783744 | 16174.5 |
| mobilization protein | DW935_12075 | Not Available | Positive | 2783729 - 2784997 | 47230.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

