Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain AM43-4BH |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1506264 bp
Thymine Count
1483148 bp
Guanine Count
1054015 bp
Cytosine Count
1111250 bp
Genome Length
5155765 bp
Protein-coding Genes
4166 genes
Non-Coding Genes
121 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | DW935_11980 | Not Available | Positive | 2770277 - 2770759 | 18614.0 |
| hypothetical protein | DW935_11985 | Not Available | Negative | 2770963 - 2771283 | 12423.6 |
| duf3872 domain-containing protein | DW935_11990 | Not Available | Negative | 2771296 - 2771754 | 17459.9 |
| conjugal transfer protein | DW935_11995 | Not Available | Negative | 2771768 - 2772349 | 21753.3 |
| conjugative transposon protein tran | DW935_12000 | Not Available | Negative | 2772353 - 2773288 | 35166.4 |
| conjugative transposon protein tram | DW935_12005 | Not Available | Negative | 2773322 - 2774653 | 48297.3 |
| duf3989 domain-containing protein | DW935_12010 | Not Available | Negative | 2774631 - 2774927 | 11528.0 |
| conjugative transposon protein trak | DW935_12015 | Not Available | Negative | 2774932 - 2775555 | 23898.7 |
| conjugative transposon protein traj | DW935_12020 | Not Available | Negative | 2775576 - 2776571 | 36851.1 |
| duf4141 domain-containing protein | DW935_12025 | Not Available | Negative | 2776591 - 2777217 | 23309.1 |
Pathways
216 pathways
Health Effects
No health effects information available for this bacterium.

