Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain AM43-4BH |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1506264 bp
Thymine Count
1483148 bp
Guanine Count
1054015 bp
Cytosine Count
1111250 bp
Genome Length
5155765 bp
Protein-coding Genes
4166 genes
Non-Coding Genes
121 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| glycoside hydrolase | DW935_11930 | Not Available | Positive | 2759427 - 2760464 | 38644.9 |
| aminopeptidase | DW935_11935 | Not Available | Negative | 2760475 - 2762997 | 97379.2 |
| trna 2-thiouridine(34) synthase mnma | DW935_11940 | Not Available | Negative | 2763001 - 2764128 | 42806.4 |
| 4fe-4s dicluster domain-containing protein | DW935_11945 | Not Available | Negative | 2764128 - 2764907 | 28475.3 |
| arac family transcriptional regulator | DW935_11950 | Not Available | Positive | 2765500 - 2765764 | 10101.9 |
| site-specific integrase | DW935_11955 | Not Available | Positive | 2766089 - 2767318 | 46829.3 |
| hypothetical protein | DW935_11960 | Not Available | Negative | 2767590 - 2769002 | 54171.0 |
| hypothetical protein | DW935_11965 | Not Available | Positive | 2769168 - 2769404 | 8944.07 |
| antirestriction protein arda | DW935_11970 | Not Available | Positive | 2769433 - 2769966 | 21140.6 |
| duf3873 domain-containing protein | DW935_11975 | Not Available | Positive | 2770044 - 2770265 | 8546.14 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

