Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain AM43-4BH |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1506264 bp
Thymine Count
1483148 bp
Guanine Count
1054015 bp
Cytosine Count
1111250 bp
Genome Length
5155765 bp
Protein-coding Genes
4166 genes
Non-Coding Genes
121 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| mannonate dehydratase | DW935_11880 | Not Available | Positive | 2741073 - 2742248 | 44467.5 |
| tonb-dependent receptor | DW935_11885 | Not Available | Positive | 2742452 - 2745706 | 120247.0 |
| ragb/susd family nutrient uptake outer membrane protein | DW935_11890 | Not Available | Positive | 2745719 - 2747560 | 69044.9 |
| duf4976 domain-containing protein | DW935_11895 | Not Available | Positive | 2747594 - 2749174 | 61341.8 |
| hybrid sensor histidine kinase/response regulator | DW935_11900 | Not Available | Negative | 2749231 - 2753118 | 148493.0 |
| glycoside hydrolase family 95 protein | DW935_11905 | Not Available | Negative | 2753323 - 2755779 | 92115.2 |
| insulinase family protein | DW935_11910 | Not Available | Negative | 2755878 - 2757098 | 46475.2 |
| tigr00730 family rossman fold protein | DW935_11915 | Not Available | Positive | 2757200 - 2757736 | 19870.1 |
| sis domain-containing protein | DW935_11920 | Not Available | Positive | 2757754 - 2758356 | 21797.5 |
| carbohydrate kinase | DW935_11925 | Not Available | Positive | 2758467 - 2759387 | 34622.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

