Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain AM43-4BH |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1506264 bp
Thymine Count
1483148 bp
Guanine Count
1054015 bp
Cytosine Count
1111250 bp
Genome Length
5155765 bp
Protein-coding Genes
4166 genes
Non-Coding Genes
121 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| fimbrillin family protein | DW935_11775 | Not Available | Negative | 2716970 - 2717959 | 35806.3 |
| duf5119 domain-containing protein | DW935_11780 | Not Available | Negative | 2718008 - 2719003 | 36253.9 |
| duf3575 domain-containing protein | DW935_11785 | Not Available | Negative | 2718970 - 2720337 | 52136.3 |
| glycoside hydrolase family 29 | DW935_11795 | Not Available | Positive | 2720932 - 2722815 | 70587.9 |
| dna-protecting protein dpra | DW935_11800 | Not Available | Negative | 2722896 - 2724011 | 40940.4 |
| acyl-coa thioesterase | DW935_11805 | Not Available | Negative | 2724008 - 2724415 | 15657.8 |
| pp_02326 | DW935_11810 | Not Available | Positive | 2724474 - 2725391 | Not Available |
| hypothetical protein | DW935_11815 | Not Available | Negative | 2725587 - 2725820 | 9032.89 |
| helicase | DW935_11820 | Not Available | Positive | 2725910 - 2727166 | 48877.9 |
| lactaldehyde reductase | DW935_11825 | Not Available | Positive | 2727380 - 2728534 | 40917.7 |
Pathways
216 pathways
Health Effects
No health effects information available for this bacterium.

