Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain AM43-4BH |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1506264 bp
Thymine Count
1483148 bp
Guanine Count
1054015 bp
Cytosine Count
1111250 bp
Genome Length
5155765 bp
Protein-coding Genes
4166 genes
Non-Coding Genes
121 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | DW935_11665 | Not Available | Negative | 2690150 - 2691382 | 44163.1 |
| dna damage-inducible protein d | DW935_11670 | Not Available | Positive | 2691945 - 2692721 | 29200.0 |
| hypothetical protein | DW935_11675 | Not Available | Negative | 2692744 - 2693541 | 29162.1 |
| murein l,d-transpeptidase | DW935_11680 | Not Available | Negative | 2693544 - 2694563 | 38972.9 |
| site-specific integrase | DW935_11685 | Not Available | Positive | 2694771 - 2695709 | 36218.7 |
| arac family transcriptional regulator | DW935_11690 | Not Available | Positive | 2696522 - 2697016 | 19177.3 |
| hypothetical protein | DW935_11695 | Not Available | Positive | 2697061 - 2700084 | 109980.0 |
| hypothetical protein | DW935_11700 | Not Available | Positive | 2700168 - 2700647 | 18251.3 |
| hypothetical protein | DW935_11705 | Not Available | Negative | 2700738 - 2700923 | 7429.17 |
| acid phosphatase | DW935_11715 | Not Available | Positive | 2703984 - 2704955 | 37339.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

