Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain AM43-4BH |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1506264 bp
Thymine Count
1483148 bp
Guanine Count
1054015 bp
Cytosine Count
1111250 bp
Genome Length
5155765 bp
Protein-coding Genes
4166 genes
Non-Coding Genes
121 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| tetratricopeptide repeat protein | DW935_11560 | Not Available | Positive | 2668739 - 2670394 | 64330.6 |
| hypothetical protein | DW935_11565 | Not Available | Positive | 2670511 - 2670756 | 9250.33 |
| porin family protein | DW935_11570 | Not Available | Positive | 2671064 - 2671762 | 25718.4 |
| chloramphenicol acetyltransferase | DW935_11575 | Not Available | Negative | 2671998 - 2672654 | 25304.1 |
| prolipoprotein diacylglyceryl transferase | DW935_11580 | Not Available | Negative | 2672655 - 2673476 | 31477.1 |
| redox-regulated atpase ychf | DW935_11590 | Not Available | Negative | 2674505 - 2675608 | 40801.9 |
| duf3836 domain-containing protein | DW935_11595 | Not Available | Negative | 2675809 - 2676195 | 15047.1 |
| hypothetical protein | DW935_11600 | Not Available | Negative | 2676222 - 2676434 | 8063.96 |
| dna polymerase i | DW935_11605 | Not Available | Negative | 2676505 - 2679420 | 109365.0 |
| polyprenyl synthetase family protein | DW935_11610 | Not Available | Positive | 2679512 - 2680486 | 36285.5 |
Pathways
216 pathways
Health Effects
No health effects information available for this bacterium.

