Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain AM43-4BH |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1506264 bp
Thymine Count
1483148 bp
Guanine Count
1054015 bp
Cytosine Count
1111250 bp
Genome Length
5155765 bp
Protein-coding Genes
4166 genes
Non-Coding Genes
121 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | DW935_00710 | Not Available | Positive | 154505 - 155200 | 25689.8 |
| hypothetical protein | DW935_00715 | Not Available | Positive | 155213 - 155899 | 26440.1 |
| hypothetical protein | DW935_00720 | Not Available | Positive | 155912 - 156556 | 21915.4 |
| m23 family peptidase | DW935_00725 | Not Available | Positive | 156583 - 157413 | 30967.1 |
| hypothetical protein | DW935_00730 | Not Available | Positive | 157437 - 157718 | 11155.1 |
| hypothetical protein | DW935_00735 | Not Available | Positive | 157733 - 159523 | 66431.5 |
| duf1738 domain-containing protein | DW935_00740 | Not Available | Positive | 159596 - 161794 | 84323.9 |
| glucosaminidase | DW935_00745 | Not Available | Positive | 161806 - 163362 | 57570.8 |
| hypothetical protein | DW935_00750 | Not Available | Positive | 163375 - 163551 | 6671.7 |
| hypothetical protein | DW935_00755 | Not Available | Positive | 163634 - 164245 | 22991.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

