Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain AM43-4BH |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1506264 bp
Thymine Count
1483148 bp
Guanine Count
1054015 bp
Cytosine Count
1111250 bp
Genome Length
5155765 bp
Protein-coding Genes
4166 genes
Non-Coding Genes
121 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| peptidase s41 | DW935_11460 | Not Available | Negative | 2648945 - 2652199 | 121912.0 |
| Trna-gln | Not Available | Not Available | Positive | 2652334 - 2652404 | Not Available |
| site-specific integrase | DW935_11470 | Not Available | Positive | 2652577 - 2653827 | 48872.3 |
| dna-binding protein | DW935_11475 | Not Available | Positive | 2653839 - 2654102 | 9993.02 |
| duf4373 domain-containing protein | DW935_11480 | Not Available | Positive | 2654107 - 2655147 | 39724.0 |
| hypothetical protein | DW935_11485 | Not Available | Positive | 2655169 - 2655423 | 10006.8 |
| hypothetical protein | DW935_11490 | Not Available | Positive | 2655441 - 2655635 | 7289.79 |
| hypothetical protein | DW935_11495 | Not Available | Positive | 2655632 - 2655910 | 10591.7 |
| hypothetical protein | DW935_11500 | Not Available | Negative | 2656023 - 2656214 | 7441.38 |
| hypothetical protein | DW935_11505 | Not Available | Positive | 2656213 - 2656503 | 11067.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

