Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain AM43-4BH |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1506264 bp
Thymine Count
1483148 bp
Guanine Count
1054015 bp
Cytosine Count
1111250 bp
Genome Length
5155765 bp
Protein-coding Genes
4166 genes
Non-Coding Genes
121 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| diphosphate--fructose-6-phosphate 1-phosphotransferase | DW935_11310 | Not Available | Negative | 2609948 - 2611591 | 59907.0 |
| hypothetical protein | DW935_11315 | Not Available | Positive | 2611742 - 2611990 | 9206.38 |
| acyltransferase | DW935_11320 | Not Available | Positive | 2612001 - 2612558 | 21336.3 |
| alpha-1,3-galactosidase b | DW935_11325 | Not Available | Negative | 2612641 - 2614458 | 68935.8 |
| xanthan lyase | DW935_11330 | Not Available | Positive | 2614541 - 2617411 | 106936.0 |
| hypothetical protein | DW935_11335 | Not Available | Positive | 2617502 - 2617819 | 12230.6 |
| ygiq family radical sam protein | DW935_11340 | Not Available | Positive | 2617870 - 2619759 | 72365.2 |
| sodium-translocating pyrophosphatase | DW935_11345 | Not Available | Positive | 2620022 - 2622226 | 77052.8 |
| hypothetical protein | DW935_11350 | Not Available | Negative | 2622296 - 2624080 | 69435.1 |
| amino acid-binding protein | DW935_11355 | Not Available | Negative | 2624316 - 2624732 | 15370.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

