Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain AM43-4BH |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1506264 bp
Thymine Count
1483148 bp
Guanine Count
1054015 bp
Cytosine Count
1111250 bp
Genome Length
5155765 bp
Protein-coding Genes
4166 genes
Non-Coding Genes
121 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| duf4468 domain-containing protein | DW935_11205 | Not Available | Positive | 2590539 - 2591636 | 40449.4 |
| tetratricopeptide repeat protein | DW935_11210 | Not Available | Positive | 2592001 - 2592297 | 11531.6 |
| 4fe-4s dicluster domain-containing protein | DW935_11215 | Not Available | Positive | 2592308 - 2592538 | 8117.04 |
| 3-methyl-2-oxobutanoate dehydrogenase subunit vorb | DW935_11220 | Not Available | Positive | 2592550 - 2593632 | 39202.6 |
| hypothetical protein | DW935_11225 | Not Available | Positive | 2593639 - 2593806 | 6434.4 |
| 2-oxoglutarate oxidoreductase | DW935_11230 | Not Available | Positive | 2593825 - 2594589 | 27912.9 |
| 2-oxoglutarate ferredoxin oxidoreductase subunit gamma | DW935_11235 | Not Available | Positive | 2594603 - 2595145 | 19888.6 |
| hypothetical protein | DW935_11240 | Not Available | Negative | 2595139 - 2595327 | 7558.39 |
| hypothetical protein | DW935_11245 | Not Available | Positive | 2595239 - 2597350 | 80786.2 |
| glutamine abc transporter substrate-binding protein | DW935_11250 | Not Available | Positive | 2597359 - 2598177 | 30961.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

