Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain AM43-4BH |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1506264 bp
Thymine Count
1483148 bp
Guanine Count
1054015 bp
Cytosine Count
1111250 bp
Genome Length
5155765 bp
Protein-coding Genes
4166 genes
Non-Coding Genes
121 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| mfs transporter | DW935_11155 | Not Available | Positive | 2577419 - 2578759 | 47498.5 |
| galactokinase | DW935_11160 | Not Available | Positive | 2578800 - 2579954 | 42994.0 |
| galactose mutarotase | DW935_11165 | Not Available | Positive | 2580151 - 2581305 | 41993.6 |
| sss family transporter | DW935_11170 | Not Available | Positive | 2581332 - 2583074 | 64455.8 |
| nudix hydrolase | DW935_11175 | Not Available | Positive | 2583150 - 2583827 | 26233.5 |
| l-ribulose-5-phosphate 4-epimerase | DW935_11180 | Not Available | Positive | 2583898 - 2584584 | 24994.8 |
| l-arabinose isomerase | DW935_11185 | Not Available | Positive | 2584624 - 2586153 | 57229.3 |
| atpase | DW935_11190 | Not Available | Positive | 2586256 - 2587854 | 57774.1 |
| transketolase | DW935_11195 | Not Available | Positive | 2587989 - 2590001 | 72436.4 |
| ribose 5-phosphate isomerase b | DW935_11200 | Not Available | Positive | 2589998 - 2590432 | 15944.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

