Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain AM43-4BH |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1506264 bp
Thymine Count
1483148 bp
Guanine Count
1054015 bp
Cytosine Count
1111250 bp
Genome Length
5155765 bp
Protein-coding Genes
4166 genes
Non-Coding Genes
121 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| duf4476 domain-containing protein | DW935_11100 | Not Available | Positive | 2565967 - 2566638 | 25434.7 |
| duf4476 domain-containing protein | DW935_11105 | Not Available | Positive | 2566672 - 2567283 | 22961.6 |
| hypothetical protein | DW935_11110 | Not Available | Negative | 2567353 - 2567676 | 11453.6 |
| cytidine deaminase | DW935_11115 | Not Available | Positive | 2567896 - 2568375 | 17702.2 |
| winged helix dna-binding domain-containing protein | DW935_11120 | Not Available | Positive | 2568372 - 2569424 | 40541.8 |
| abc-f family atpase | DW935_11130 | Not Available | Negative | 2571191 - 2572810 | 61289.0 |
| nucleotide exchange factor grpe | DW935_11135 | Not Available | Positive | 2572988 - 2573608 | 23521.8 |
| molecular chaperone dnaj | DW935_11140 | Not Available | Positive | 2573627 - 2574802 | 42201.2 |
| bifunctional folylpolyglutamate synthase/dihydrofolate synthase | DW935_11145 | Not Available | Positive | 2574897 - 2576183 | 48029.6 |
| galactose mutarotase | DW935_11150 | Not Available | Positive | 2576278 - 2577372 | 39986.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

