Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain AM43-4BH |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1506264 bp
Thymine Count
1483148 bp
Guanine Count
1054015 bp
Cytosine Count
1111250 bp
Genome Length
5155765 bp
Protein-coding Genes
4166 genes
Non-Coding Genes
121 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| abc transporter permease | DW935_11050 | Not Available | Negative | 2556003 - 2557283 | 47780.6 |
| abc transporter permease | DW935_11055 | Not Available | Negative | 2557323 - 2558573 | 48071.8 |
| abc transporter permease | DW935_11060 | Not Available | Negative | 2558605 - 2559897 | 47577.7 |
| abc transporter atp-binding protein | DW935_11065 | Not Available | Negative | 2559941 - 2560606 | 24550.0 |
| hlyd family efflux transporter periplasmic adaptor subunit | DW935_11070 | Not Available | Negative | 2560975 - 2562222 | 46548.9 |
| lysm peptidoglycan-binding domain-containing protein | DW935_11075 | Not Available | Negative | 2562384 - 2563280 | 35133.6 |
| hypothetical protein | DW935_11080 | Not Available | Negative | 2563386 - 2564027 | 24576.1 |
| hypothetical protein | DW935_11085 | Not Available | Negative | 2564183 - 2564731 | 21482.5 |
| hypothetical protein | DW935_11090 | Not Available | Negative | 2564753 - 2565115 | 13705.4 |
| rna polymerase sigma factor | DW935_11095 | Not Available | Negative | 2565123 - 2565659 | 21672.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

