Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain AM43-4BH |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1506264 bp
Thymine Count
1483148 bp
Guanine Count
1054015 bp
Cytosine Count
1111250 bp
Genome Length
5155765 bp
Protein-coding Genes
4166 genes
Non-Coding Genes
121 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| uridine kinase | DW935_10995 | Not Available | Positive | 2544336 - 2544947 | 23271.3 |
| lytic transglycosylase f | DW935_11000 | Not Available | Positive | 2544944 - 2546323 | 52189.4 |
| hypothetical protein | DW935_11005 | Not Available | Negative | 2546545 - 2546733 | 6782.02 |
| hypothetical protein | DW935_11015 | Not Available | Negative | 2547385 - 2547552 | 6557.93 |
| pas domain-containing protein | DW935_11020 | Not Available | Negative | 2547794 - 2549089 | 49040.2 |
| sigma-54-dependent fis family transcriptional regulator | DW935_11025 | Not Available | Negative | 2549112 - 2550467 | 50708.5 |
| tolc family protein | DW935_11030 | Not Available | Negative | 2550553 - 2552037 | 56980.8 |
| abc transporter permease | DW935_11035 | Not Available | Negative | 2552191 - 2553435 | 47829.8 |
| multidrug abc transporter substrate-binding protein | DW935_11040 | Not Available | Negative | 2553449 - 2554705 | 47348.6 |
| abc transporter permease | DW935_11045 | Not Available | Negative | 2554728 - 2555999 | 48154.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

