Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain AM43-4BH |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1506264 bp
Thymine Count
1483148 bp
Guanine Count
1054015 bp
Cytosine Count
1111250 bp
Genome Length
5155765 bp
Protein-coding Genes
4166 genes
Non-Coding Genes
121 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| thioredoxin | DW935_10945 | Not Available | Positive | 2535073 - 2535531 | 16958.8 |
| nadh peroxidase | DW935_10950 | Not Available | Negative | 2535635 - 2536186 | 20566.4 |
| transcriptional repressor | DW935_10955 | Not Available | Negative | 2536264 - 2536674 | 15560.8 |
| nad(+) synthase | DW935_10960 | Not Available | Positive | 2536839 - 2538764 | 71124.6 |
| bifunctional histidinol-phosphatase/imidazoleglycerol-phosphate dehydratase hisb | DW935_10965 | Not Available | Negative | 2538854 - 2539972 | 42299.9 |
| histidinol-phosphate transaminase | DW935_10970 | Not Available | Negative | 2539976 - 2541016 | 39610.4 |
| histidinol dehydrogenase | DW935_10975 | Not Available | Negative | 2541019 - 2542299 | 46544.2 |
| atp phosphoribosyltransferase | DW935_10980 | Not Available | Negative | 2542349 - 2543200 | 31336.4 |
| paai family thioesterase | DW935_10985 | Not Available | Negative | 2543429 - 2543920 | 18785.7 |
| dabb family protein | DW935_10990 | Not Available | Negative | 2543931 - 2544230 | 11090.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

