Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain AM43-4BH |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1506264 bp
Thymine Count
1483148 bp
Guanine Count
1054015 bp
Cytosine Count
1111250 bp
Genome Length
5155765 bp
Protein-coding Genes
4166 genes
Non-Coding Genes
121 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| tyrosine protein kinase | DW935_10780 | Not Available | Negative | 2501330 - 2503726 | 89287.1 |
| polysaccharide export protein | DW935_10785 | Not Available | Negative | 2503764 - 2504564 | 29352.7 |
| hypothetical protein | DW935_10790 | Not Available | Negative | 2504590 - 2505024 | 16620.7 |
| upxy family transcription antiterminator | DW935_10795 | Not Available | Negative | 2505042 - 2505692 | 24605.0 |
| site-specific integrase | DW935_10800 | Not Available | Negative | 2506031 - 2506966 | 36310.9 |
| hth domain-containing protein | DW935_10805 | Not Available | Positive | 2507446 - 2508987 | 58205.3 |
| haloacid dehalogenase | DW935_10815 | Not Available | Negative | 2509881 - 2510987 | 42659.9 |
| molecular chaperone dnak | DW935_10820 | Not Available | Negative | 2511087 - 2513003 | 68358.2 |
| meta domain-containing protein | DW935_10825 | Not Available | Negative | 2513332 - 2514123 | 28686.0 |
| hypothetical protein | DW935_10835 | Not Available | Negative | 2515341 - 2515562 | 8908.84 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

