Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain AM43-4BH |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1506264 bp
Thymine Count
1483148 bp
Guanine Count
1054015 bp
Cytosine Count
1111250 bp
Genome Length
5155765 bp
Protein-coding Genes
4166 genes
Non-Coding Genes
121 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| glutamine synthetase type iii | DW935_10725 | Not Available | Negative | 2485695 - 2487884 | 82847.0 |
| hypothetical protein | DW935_10730 | Not Available | Positive | 2488060 - 2490258 | 86215.9 |
| tolc family protein | DW935_10735 | Not Available | Positive | 2490321 - 2491754 | 53881.0 |
| biotin/lipoyl-binding protein | DW935_10740 | Not Available | Positive | 2491772 - 2492767 | 36927.8 |
| abc transporter permease | DW935_10745 | Not Available | Positive | 2492828 - 2494000 | 43632.7 |
| abc transporter permease | DW935_10750 | Not Available | Positive | 2493984 - 2495174 | 44503.8 |
| glycosyltransferase | DW935_10760 | Not Available | Negative | 2496294 - 2497379 | 41814.7 |
| polysaccharide pyruvyl transferase family protein | DW935_10765 | Not Available | Negative | 2497404 - 2498504 | 42483.7 |
| 4fe-4s dicluster domain-containing protein | DW935_10770 | Not Available | Negative | 2498518 - 2499735 | 46019.5 |
| lipopolysaccharide biosynthesis protein | DW935_10775 | Not Available | Negative | 2499740 - 2501263 | 57126.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

