Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain AM43-4BH |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1506264 bp
Thymine Count
1483148 bp
Guanine Count
1054015 bp
Cytosine Count
1111250 bp
Genome Length
5155765 bp
Protein-coding Genes
4166 genes
Non-Coding Genes
121 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| glutamine-hydrolyzing gmp synthase | DW935_10675 | Not Available | Negative | 2476255 - 2477562 | 48297.4 |
| gmp synthase (glutamine-hydrolyzing) | DW935_10680 | Not Available | Negative | 2477601 - 2479154 | 57645.2 |
| large conductance mechanosensitive channel protein mscl | DW935_10685 | Not Available | Negative | 2479392 - 2479832 | 15733.6 |
| type i glyceraldehyde-3-phosphate dehydrogenase | DW935_10690 | Not Available | Positive | 2479984 - 2480994 | 35961.1 |
| trna (adenosine(37)-n6)-dimethylallyltransferase miaa | DW935_10695 | Not Available | Positive | 2481116 - 2482039 | 35776.3 |
| yegs/rv2252/bmru family lipid kinase | DW935_10700 | Not Available | Positive | 2482045 - 2482974 | 35331.0 |
| 3-deoxy-8-phosphooctulonate synthase | DW935_10705 | Not Available | Positive | 2483047 - 2483844 | 28849.3 |
| ferritin | DW935_10710 | Not Available | Negative | 2484005 - 2484517 | 19740.4 |
| ccoq/fixq family cbb3-type cytochrome c oxidase assembly chaperone | DW935_10715 | Not Available | Negative | 2484550 - 2484702 | 5511.84 |
| crp/fnr family transcriptional regulator | DW935_10720 | Not Available | Negative | 2484832 - 2485533 | 26605.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

