Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain AM43-4BH |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1506264 bp
Thymine Count
1483148 bp
Guanine Count
1054015 bp
Cytosine Count
1111250 bp
Genome Length
5155765 bp
Protein-coding Genes
4166 genes
Non-Coding Genes
121 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| dna-binding response regulator | DW935_10620 | Not Available | Negative | 2460633 - 2461406 | 29809.8 |
| histidine kinase | DW935_10625 | Not Available | Negative | 2461399 - 2462427 | 38942.7 |
| tolc family protein | DW935_10630 | Not Available | Negative | 2462568 - 2463857 | 48530.8 |
| acrb/acrd/acrf family protein | DW935_10635 | Not Available | Negative | 2463844 - 2466903 | 113016.0 |
| glsb/yeaq/ymge family stress response membrane protein | DW935_10645 | Not Available | Positive | 2468188 - 2468439 | 8688.23 |
| tolc family protein | DW935_10650 | Not Available | Negative | 2468528 - 2469985 | 54862.1 |
| hydrophobe/amphiphile efflux-1 family rnd transporter | DW935_10655 | Not Available | Negative | 2469963 - 2473112 | 115634.0 |
| efflux rnd transporter periplasmic adaptor subunit | DW935_10660 | Not Available | Negative | 2473125 - 2474276 | 43842.2 |
| hypothetical protein | DW935_10665 | Not Available | Negative | 2474399 - 2474821 | 16008.7 |
| aminopeptidase p family protein | DW935_10670 | Not Available | Positive | 2474938 - 2476098 | 42448.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

