Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain AM43-4BH |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1506264 bp
Thymine Count
1483148 bp
Guanine Count
1054015 bp
Cytosine Count
1111250 bp
Genome Length
5155765 bp
Protein-coding Genes
4166 genes
Non-Coding Genes
121 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| duf4065 domain-containing protein | DW935_00605 | Not Available | Positive | 141866 - 142423 | 21054.3 |
| hypothetical protein | DW935_00610 | Not Available | Positive | 142429 - 142914 | 18452.4 |
| hypothetical protein | DW935_00615 | Not Available | Positive | 142934 - 143287 | 13166.5 |
| hypothetical protein | DW935_00620 | Not Available | Negative | 143427 - 143999 | 22089.7 |
| hypothetical protein | DW935_00625 | Not Available | Negative | 144012 - 144233 | 8210.81 |
| hypothetical protein | DW935_00635 | Not Available | Positive | 144709 - 144909 | 7572.13 |
| deaminase | DW935_00640 | Not Available | Positive | 145089 - 145574 | 17495.1 |
| hypothetical protein | DW935_00645 | Not Available | Negative | 145627 - 145803 | 6486.25 |
| duf1273 family protein | DW935_00650 | Not Available | Negative | 145916 - 146419 | 18865.8 |
| ribonucleotide-diphosphate reductase subunit alpha | DW935_00655 | Not Available | Negative | 146421 - 146987 | 21405.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

