Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain AM43-4BH |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1506264 bp
Thymine Count
1483148 bp
Guanine Count
1054015 bp
Cytosine Count
1111250 bp
Genome Length
5155765 bp
Protein-coding Genes
4166 genes
Non-Coding Genes
121 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 50s ribosomal protein l21 | DW935_10465 | Not Available | Negative | 2427020 - 2427337 | 11743.4 |
| had family hydrolase | DW935_10470 | Not Available | Negative | 2427551 - 2429620 | 79713.3 |
| nlpc/p60 family protein | DW935_10475 | Not Available | Negative | 2429676 - 2430188 | 19478.6 |
| abc transporter atp-binding protein | DW935_10480 | Not Available | Negative | 2430185 - 2430892 | 26432.7 |
| hypothetical protein | DW935_10485 | Not Available | Negative | 2430905 - 2432392 | 57446.9 |
| insulinase family protein | DW935_10490 | Not Available | Negative | 2432402 - 2435221 | 106220.0 |
| thioredoxin-disulfide reductase | DW935_10495 | Not Available | Negative | 2435252 - 2436199 | 34005.6 |
| hypothetical protein | DW935_10500 | Not Available | Negative | 2436269 - 2436883 | 23003.4 |
| dna translocase ftsk | DW935_10505 | Not Available | Negative | 2436900 - 2439365 | 91840.0 |
| duf5063 domain-containing protein | DW935_10510 | Not Available | Positive | 2439470 - 2440033 | 21633.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

