Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain AM43-4BH |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1506264 bp
Thymine Count
1483148 bp
Guanine Count
1054015 bp
Cytosine Count
1111250 bp
Genome Length
5155765 bp
Protein-coding Genes
4166 genes
Non-Coding Genes
121 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | DW935_10415 | Not Available | Positive | 2418088 - 2418369 | 10751.2 |
| hypothetical protein | DW935_10420 | Not Available | Negative | 2418518 - 2418796 | 10801.4 |
| hypothetical protein | DW935_10425 | Not Available | Positive | 2418751 - 2419125 | 14330.9 |
| duf4858 domain-containing protein | DW935_10430 | Not Available | Negative | 2419072 - 2419842 | 29526.6 |
| bifunctional dihydroorotate dehydrogenase b nad binding subunit/nadph-dependent glutamate synthase | DW935_10435 | Not Available | Negative | 2420253 - 2422550 | 82892.6 |
| mfs transporter | DW935_10440 | Not Available | Negative | 2422733 - 2423950 | 43390.6 |
| serine--trna ligase | DW935_10445 | Not Available | Negative | 2424090 - 2425364 | 47884.3 |
| nicotinamide riboside transporter pnuc | DW935_10450 | Not Available | Positive | 2425484 - 2426056 | 22114.5 |
| thiamine diphosphokinase | DW935_10455 | Not Available | Positive | 2426043 - 2426678 | 23767.4 |
| 50s ribosomal protein l27 | DW935_10460 | Not Available | Negative | 2426735 - 2426998 | 9251.19 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

