Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain AM43-4BH |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1506264 bp
Thymine Count
1483148 bp
Guanine Count
1054015 bp
Cytosine Count
1111250 bp
Genome Length
5155765 bp
Protein-coding Genes
4166 genes
Non-Coding Genes
121 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| site-specific integrase | DW935_10365 | Not Available | Negative | 2406987 - 2408099 | 43859.7 |
| dna-binding protein | DW935_10370 | Not Available | Negative | 2408215 - 2409093 | 35323.7 |
| trna uridine-5-carboxymethylaminomethyl(34) synthesis gtpase mnme | DW935_10375 | Not Available | Negative | 2409366 - 2410862 | 55215.1 |
| gaf domain-containing protein | DW935_10380 | Not Available | Negative | 2410873 - 2411358 | 18138.7 |
| phosphorylase | DW935_10385 | Not Available | Negative | 2411567 - 2412445 | 32767.5 |
| upf0365 family protein | DW935_10390 | Not Available | Negative | 2412639 - 2413640 | 36124.0 |
| nodulation efficiency protein d (nfed) | DW935_10395 | Not Available | Negative | 2413783 - 2414253 | 17112.5 |
| hypothetical protein | DW935_10400 | Not Available | Negative | 2414267 - 2415676 | 54186.8 |
| adenine nucleotide alpha hydrolase family protein | DW935_10405 | Not Available | Positive | 2415820 - 2416575 | 29155.8 |
| hypothetical protein | DW935_10410 | Not Available | Negative | 2417269 - 2417490 | 8477.08 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

