Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain AM43-4BH |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1506264 bp
Thymine Count
1483148 bp
Guanine Count
1054015 bp
Cytosine Count
1111250 bp
Genome Length
5155765 bp
Protein-coding Genes
4166 genes
Non-Coding Genes
121 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| endonuclease | DW935_10300 | Not Available | Positive | 2392222 - 2395113 | 111736.0 |
| pd-(d/e)xk motif protein | DW935_10305 | Not Available | Positive | 2395103 - 2396014 | 34799.3 |
| hypothetical protein | DW935_10310 | Not Available | Positive | 2396027 - 2398144 | 80730.7 |
| hypothetical protein | DW935_10315 | Not Available | Positive | 2398155 - 2399147 | 38295.1 |
| hypothetical protein | DW935_10320 | Not Available | Positive | 2399144 - 2400949 | 69344.8 |
| hypothetical protein | DW935_10325 | Not Available | Positive | 2400953 - 2401912 | 36494.6 |
| hypothetical protein | DW935_10330 | Not Available | Positive | 2401957 - 2402220 | 10339.4 |
| very short patch repair endonuclease | DW935_10335 | Not Available | Positive | 2402249 - 2402758 | 20458.8 |
| cell filamentation protein fic | DW935_10340 | Not Available | Positive | 2402786 - 2403808 | 39434.9 |
| dna-binding protein | DW935_10355 | Not Available | Negative | 2405527 - 2405904 | 14527.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

