Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain AM43-4BH |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1506264 bp
Thymine Count
1483148 bp
Guanine Count
1054015 bp
Cytosine Count
1111250 bp
Genome Length
5155765 bp
Protein-coding Genes
4166 genes
Non-Coding Genes
121 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| restriction endonuclease | DW935_10200 | Not Available | Negative | 2364021 - 2368166 | 159485.0 |
| atp-dependent helicase | DW935_10205 | Not Available | Negative | 2368182 - 2371061 | 110485.0 |
| helicase | DW935_10210 | Not Available | Negative | 2371067 - 2376253 | 200012.0 |
| xre family transcriptional regulator | DW935_10215 | Not Available | Negative | 2376272 - 2376484 | 8193.06 |
| hypothetical protein | DW935_10220 | Not Available | Positive | 2376654 - 2377517 | 33378.1 |
| hypothetical protein | DW935_10225 | Not Available | Negative | 2377578 - 2377982 | 16071.1 |
| mobilization protein | DW935_10230 | Not Available | Negative | 2378018 - 2378956 | 36371.5 |
| plasmid mobilization relaxosome protein mobc | DW935_10235 | Not Available | Negative | 2378946 - 2379254 | 11905.3 |
| hypothetical protein | DW935_10240 | Not Available | Negative | 2379394 - 2380467 | 41636.1 |
| duf3987 domain-containing protein | DW935_10245 | Not Available | Negative | 2380551 - 2381918 | 52433.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

