Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain AM43-4BH |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1506264 bp
Thymine Count
1483148 bp
Guanine Count
1054015 bp
Cytosine Count
1111250 bp
Genome Length
5155765 bp
Protein-coding Genes
4166 genes
Non-Coding Genes
121 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| transcriptional repressor | DW935_10080 | Not Available | Positive | 2336433 - 2336858 | 16193.7 |
| acyltransferase | DW935_10085 | Not Available | Negative | 2337031 - 2338182 | 43081.8 |
| crp/fnr family transcriptional regulator | DW935_10090 | Not Available | Negative | 2338300 - 2338863 | 22255.1 |
| hypothetical protein | DW935_10100 | Not Available | Positive | 2339392 - 2339826 | 16911.9 |
| ph domain-containing protein | DW935_10105 | Not Available | Positive | 2339995 - 2340438 | 16664.8 |
| hypothetical protein | DW935_10110 | Not Available | Positive | 2340558 - 2340770 | 8579.56 |
| helix-turn-helix domain-containing protein | DW935_10115 | Not Available | Positive | 2341491 - 2341826 | 13348.1 |
| bifunctional dna primase/helicase | DW935_10120 | Not Available | Positive | 2341819 - 2343891 | 77726.7 |
| dna-binding protein | DW935_10125 | Not Available | Positive | 2343888 - 2344307 | 16505.4 |
| hypothetical protein | DW935_10130 | Not Available | Positive | 2344549 - 2345886 | 51350.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

