Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain AM43-4BH |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1506264 bp
Thymine Count
1483148 bp
Guanine Count
1054015 bp
Cytosine Count
1111250 bp
Genome Length
5155765 bp
Protein-coding Genes
4166 genes
Non-Coding Genes
121 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| tlpa family protein disulfide reductase | DW935_09980 | Not Available | Negative | 2319335 - 2319856 | 19785.8 |
| mfs transporter | DW935_09985 | Not Available | Positive | 2319916 - 2321091 | 42775.8 |
| duf2721 domain-containing protein | DW935_09990 | Not Available | Negative | 2321093 - 2321482 | 14601.4 |
| duf3843 family protein | DW935_09995 | Not Available | Positive | 2321601 - 2322770 | 45891.5 |
| 2-hydroxyacid dehydrogenase | DW935_10000 | Not Available | Negative | 2322767 - 2323774 | 37605.3 |
| septum formation protein maf | DW935_10005 | Not Available | Negative | 2323841 - 2324422 | 21772.4 |
| 3-deoxy-d-manno-octulosonate 8-phosphate phosphatase | DW935_10010 | Not Available | Negative | 2324440 - 2324958 | 19125.2 |
| duf2520 domain-containing protein | DW935_10015 | Not Available | Negative | 2324964 - 2325770 | 29767.2 |
| hypothetical protein | DW935_10020 | Not Available | Negative | 2325770 - 2326096 | 11884.3 |
| nad(p)h nitroreductase | DW935_10025 | Not Available | Negative | 2326099 - 2326635 | 20051.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

