Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Phocaeicola vulgatus strain AM43-4BH
Accession NumberQSFK00000000.1
Gene Summary
Adenine Count
1506264 bp
Thymine Count
1483148 bp
Guanine Count
1054015 bp
Cytosine Count
1111250 bp
Genome Length
5155765 bp
Protein-coding Genes
4166 genes
Non-Coding Genes
121 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| Prohead protease | DW935_01070 | Not Available | + | 202825 - 204015 | 43905.4 |
| Structural protein | DW935_01075 | Not Available | + | 204018 - 204929 | 33746.8 |
| Structural protein | DW935_01080 | Not Available | + | 204941 - 206137 | 43273.0 |
| Trna-met; | Not Available | Not Available | + | 205313 - 205388 | Not Available |
| Hypothetical protein | DW935_01085 | Not Available | + | 206149 - 206562 | 15049.7 |
| hypothetical protein | DW935_01090 | Not Available | + | 206586 - 206891 | 11696.9 |
| Putative tape measure domain protein | DW935_01095 | Not Available | + | 207055 - 208776 | 62166.5 |
| hypothetical protein | DW935_01100 | Not Available | + | 208773 - 209381 | 23555.4 |
| Structural protein | DW935_01105 | Not Available | + | 209383 - 210336 | 35826.4 |
| hypothetical protein | DW935_01110 | Not Available | + | 210342 - 210833 | 17456.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
