Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain AM43-4BH |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1506264 bp
Thymine Count
1483148 bp
Guanine Count
1054015 bp
Cytosine Count
1111250 bp
Genome Length
5155765 bp
Protein-coding Genes
4166 genes
Non-Coding Genes
121 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| purine permease | DW935_09830 | Not Available | Positive | 2286302 - 2287633 | 46642.3 |
| phosphotransferase | DW935_09835 | Not Available | Positive | 2287736 - 2289166 | 55467.0 |
| nucleotidyltransferase family protein | DW935_09840 | Not Available | Positive | 2289163 - 2290008 | 32185.8 |
| methionine synthase | DW935_09845 | Not Available | Negative | 2290207 - 2292960 | 100826.0 |
| ssra-binding protein | DW935_09850 | Not Available | Negative | 2292998 - 2293450 | 17572.4 |
| duf1282 domain-containing protein | DW935_09855 | Not Available | Negative | 2293450 - 2294019 | 21095.2 |
| recombinase | DW935_09860 | Not Available | Positive | 2294394 - 2295482 | 41866.2 |
| hypothetical protein | DW935_09865 | Not Available | Positive | 2295875 - 2296213 | 13051.2 |
| duf5119 domain-containing protein | DW935_09870 | Not Available | Positive | 2296210 - 2297217 | 37815.5 |
| fimbrillin family protein | DW935_09875 | Not Available | Positive | 2297261 - 2298400 | 42246.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

