Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain AM43-4BH |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1506264 bp
Thymine Count
1483148 bp
Guanine Count
1054015 bp
Cytosine Count
1111250 bp
Genome Length
5155765 bp
Protein-coding Genes
4166 genes
Non-Coding Genes
121 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hlyc/corc family transporter | DW935_09680 | Not Available | Positive | 2251870 - 2253129 | 47675.1 |
| peptidylprolyl isomerase | DW935_09685 | Not Available | Positive | 2253235 - 2255367 | 78893.4 |
| energy transducer tonb | DW935_09690 | Not Available | Negative | 2255998 - 2257083 | 41952.6 |
| ketol-acid reductoisomerase | DW935_09695 | Not Available | Negative | 2257211 - 2258254 | 38168.5 |
| acyl-[acyl-carrier-protein] thioesterase | DW935_09700 | Not Available | Negative | 2258289 - 2259032 | 28470.1 |
| acetolactate synthase small subunit | DW935_09705 | Not Available | Negative | 2259032 - 2259586 | 21284.6 |
| biosynthetic-type acetolactate synthase large subunit | DW935_09710 | Not Available | Negative | 2259597 - 2261294 | 61855.6 |
| dihydroxy-acid dehydratase | DW935_09715 | Not Available | Negative | 2261394 - 2263196 | 64117.2 |
| hypothetical protein | DW935_09720 | Not Available | Negative | 2263607 - 2263981 | 14035.0 |
| peptidylprolyl isomerase | DW935_09725 | Not Available | Positive | 2264337 - 2264915 | 21017.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

