Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain AM43-4BH |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1506264 bp
Thymine Count
1483148 bp
Guanine Count
1054015 bp
Cytosine Count
1111250 bp
Genome Length
5155765 bp
Protein-coding Genes
4166 genes
Non-Coding Genes
121 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | DW935_09630 | Not Available | Positive | 2239416 - 2239793 | 14859.8 |
| hypothetical protein | DW935_09635 | Not Available | Negative | 2239867 - 2240316 | 17021.0 |
| hypothetical protein | DW935_09640 | Not Available | Negative | 2240387 - 2241379 | 37662.1 |
| protein translocase subunit seca | DW935_09645 | Not Available | Negative | 2241502 - 2244798 | 125159.0 |
| alkaline phosphatase family protein | DW935_09650 | Not Available | Negative | 2244894 - 2246477 | 59448.7 |
| duf4105 domain-containing protein | DW935_09655 | Not Available | Negative | 2246474 - 2247649 | 44974.2 |
| type iii pantothenate kinase | DW935_09660 | Not Available | Positive | 2247776 - 2248504 | 26911.9 |
| hypothetical protein | DW935_09665 | Not Available | Positive | 2248491 - 2249807 | 49216.0 |
| tetratricopeptide repeat protein | DW935_09670 | Not Available | Positive | 2249854 - 2251209 | 50268.8 |
| lps export abc transporter periplasmic protein lptc | DW935_09675 | Not Available | Positive | 2251212 - 2251856 | 24876.2 |
Pathways
216 pathways
Health Effects
No health effects information available for this bacterium.

