Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain AM43-4BH |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1506264 bp
Thymine Count
1483148 bp
Guanine Count
1054015 bp
Cytosine Count
1111250 bp
Genome Length
5155765 bp
Protein-coding Genes
4166 genes
Non-Coding Genes
121 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | DW935_00490 | Not Available | Positive | 112915 - 113793 | 33990.1 |
| hypothetical protein | DW935_00495 | Not Available | Positive | 113797 - 114945 | 43337.6 |
| hypothetical protein | DW935_00500 | Not Available | Positive | 114966 - 115463 | 19326.7 |
| hypothetical protein | DW935_00505 | Not Available | Positive | 115460 - 115906 | 17559.2 |
| pkd domain-containing protein | DW935_00510 | Not Available | Positive | 115917 - 116858 | 35932.8 |
| hypothetical protein | DW935_00515 | Not Available | Positive | 116855 - 119203 | 90067.7 |
| hypothetical protein | DW935_00520 | Not Available | Positive | 119209 - 120012 | 30951.4 |
| type vi secretion system needle protein hcp | DW935_00525 | Not Available | Positive | 120527 - 120922 | 14749.5 |
| type iv secretion protein rhs | DW935_00530 | Not Available | Positive | 121033 - 122796 | 63158.2 |
| hypothetical protein | DW935_00535 | Not Available | Positive | 122836 - 124179 | 51243.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

