Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain AM43-4BH |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1506264 bp
Thymine Count
1483148 bp
Guanine Count
1054015 bp
Cytosine Count
1111250 bp
Genome Length
5155765 bp
Protein-coding Genes
4166 genes
Non-Coding Genes
121 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| preprotein translocase subunit secg | DW935_09420 | Not Available | Negative | 2196107 - 2196472 | 12571.2 |
| tetratricopeptide repeat protein | DW935_09425 | Not Available | Negative | 2196478 - 2197230 | 29436.1 |
| hypothetical protein | DW935_09430 | Not Available | Negative | 2197247 - 2197774 | 19738.6 |
| sigma-54-dependent fis family transcriptional regulator | DW935_09435 | Not Available | Negative | 2197761 - 2199026 | 46861.1 |
| inositol-3-phosphate synthase | DW935_09440 | Not Available | Negative | 2199193 - 2200500 | 48823.8 |
| ribokinase | DW935_09445 | Not Available | Positive | 2200636 - 2201532 | 33171.6 |
| sugar mfs transporter | DW935_09450 | Not Available | Negative | 2201586 - 2202785 | 44345.3 |
| had family hydrolase | DW935_09455 | Not Available | Negative | 2202792 - 2203514 | 27106.8 |
| upf0104 family protein | DW935_09460 | Not Available | Negative | 2203519 - 2204520 | 37585.2 |
| cdp-alcohol phosphatidyltransferase family protein | DW935_09465 | Not Available | Negative | 2204517 - 2205467 | 37224.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

