Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain AM43-4BH |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1506264 bp
Thymine Count
1483148 bp
Guanine Count
1054015 bp
Cytosine Count
1111250 bp
Genome Length
5155765 bp
Protein-coding Genes
4166 genes
Non-Coding Genes
121 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| Trna-tyr | Not Available | Not Available | Positive | 2184078 - 2184160 | Not Available |
| Trna-thr | Not Available | Not Available | Positive | 2184201 - 2184277 | Not Available |
| hpf/raia family ribosome-associated protein | DW935_09335 | Not Available | Negative | 2184376 - 2184514 | 5077.08 |
| ribosome-associated translation inhibitor raia | DW935_09340 | Not Available | Negative | 2184646 - 2184945 | 11325.7 |
| recombinase | DW935_09345 | Not Available | Negative | 2184960 - 2185841 | 34003.6 |
| 30s ribosomal protein s21 | DW935_09350 | Not Available | Negative | 2185919 - 2186110 | 7526.36 |
| aminopeptidase p family protein | DW935_09355 | Not Available | Positive | 2186279 - 2188060 | 66941.2 |
| gamma carbonic anhydrase family protein | DW935_09360 | Not Available | Positive | 2188070 - 2188594 | 18518.4 |
| porin family protein | DW935_09365 | Not Available | Positive | 2188640 - 2189131 | 18002.5 |
| gnat family n-acetyltransferase | DW935_09370 | Not Available | Positive | 2189245 - 2190201 | 36768.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

