Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain AM43-4BH |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1506264 bp
Thymine Count
1483148 bp
Guanine Count
1054015 bp
Cytosine Count
1111250 bp
Genome Length
5155765 bp
Protein-coding Genes
4166 genes
Non-Coding Genes
121 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 50s ribosomal protein l7/l12 | DW935_09275 | Not Available | Negative | 2179582 - 2179956 | 12654.2 |
| 50s ribosomal protein l10 | DW935_09280 | Not Available | Negative | 2180003 - 2180521 | 18678.8 |
| 50s ribosomal protein l1 | DW935_09285 | Not Available | Negative | 2180537 - 2181235 | 24935.6 |
| 50s ribosomal protein l11 | DW935_09290 | Not Available | Negative | 2181251 - 2181694 | 15797.5 |
| transcription termination/antitermination factor nusg | DW935_09295 | Not Available | Negative | 2181755 - 2182297 | 20140.3 |
| preprotein translocase subunit sece | DW935_09300 | Not Available | Negative | 2182311 - 2182505 | 7402.06 |
| Trna-trp | Not Available | Not Available | Positive | 2182519 - 2182594 | Not Available |
| elongation factor tu | DW935_09310 | Not Available | Negative | 2182652 - 2183836 | 43565.6 |
| Trna-thr | Not Available | Not Available | Positive | 2183888 - 2183959 | Not Available |
| Trna-gly | Not Available | Not Available | Positive | 2183972 - 2184044 | Not Available |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

