Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain AM43-4BH |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1506264 bp
Thymine Count
1483148 bp
Guanine Count
1054015 bp
Cytosine Count
1111250 bp
Genome Length
5155765 bp
Protein-coding Genes
4166 genes
Non-Coding Genes
121 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 50s ribosomal protein l23 | DW935_09225 | Not Available | Negative | 2165450 - 2165740 | 10804.2 |
| 50s ribosomal protein l4 | DW935_09230 | Not Available | Negative | 2165762 - 2166388 | 23045.8 |
| 50s ribosomal protein l3 | DW935_09235 | Not Available | Negative | 2166388 - 2167005 | 21900.8 |
| 30s ribosomal protein s10 | DW935_09240 | Not Available | Negative | 2167027 - 2167332 | 11419.0 |
| elongation factor g | DW935_09245 | Not Available | Negative | 2167417 - 2169534 | 77460.5 |
| 30s ribosomal protein s7 | DW935_09250 | Not Available | Negative | 2169566 - 2170042 | 18204.1 |
| 30s ribosomal protein s12 | DW935_09255 | Not Available | Negative | 2170191 - 2170604 | 14994.4 |
| duf3467 domain-containing protein | DW935_09260 | Not Available | Negative | 2170793 - 2171134 | 12561.0 |
| dna-directed rna polymerase subunit beta' | DW935_09265 | Not Available | Negative | 2171342 - 2175628 | 158848.0 |
| dna-directed rna polymerase subunit beta | DW935_09270 | Not Available | Negative | 2175667 - 2179479 | 142493.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

