Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain AM43-4BH |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1506264 bp
Thymine Count
1483148 bp
Guanine Count
1054015 bp
Cytosine Count
1111250 bp
Genome Length
5155765 bp
Protein-coding Genes
4166 genes
Non-Coding Genes
121 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 50s ribosomal protein l5 | DW935_09175 | Not Available | Negative | 2160951 - 2161508 | 20860.8 |
| 50s ribosomal protein l24 | DW935_09180 | Not Available | Negative | 2161508 - 2161831 | 11658.2 |
| 50s ribosomal protein l14 | DW935_09185 | Not Available | Negative | 2161852 - 2162217 | 13058.1 |
| 30s ribosomal protein s17 | DW935_09190 | Not Available | Negative | 2162220 - 2162477 | 9981.21 |
| 50s ribosomal protein l29 | DW935_09195 | Not Available | Negative | 2162489 - 2162683 | 7453.1 |
| 50s ribosomal protein l16 | DW935_09200 | Not Available | Negative | 2162690 - 2163124 | 16206.8 |
| 30s ribosomal protein s3 | DW935_09205 | Not Available | Negative | 2163146 - 2163877 | 27103.1 |
| 50s ribosomal protein l22 | DW935_09210 | Not Available | Negative | 2163884 - 2164294 | 15484.9 |
| 30s ribosomal protein s19 | DW935_09215 | Not Available | Negative | 2164331 - 2164600 | 9895.23 |
| 50s ribosomal protein l2 | DW935_09220 | Not Available | Negative | 2164623 - 2165444 | 29602.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

