Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain AM43-4BH |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1506264 bp
Thymine Count
1483148 bp
Guanine Count
1054015 bp
Cytosine Count
1111250 bp
Genome Length
5155765 bp
Protein-coding Genes
4166 genes
Non-Coding Genes
121 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| translation initiation factor if-1 | DW935_09125 | Not Available | Negative | 2155681 - 2155899 | 8235.14 |
| type i methionyl aminopeptidase | DW935_09130 | Not Available | Negative | 2155901 - 2156698 | 29142.0 |
| preprotein translocase subunit secy | DW935_09135 | Not Available | Negative | 2156709 - 2158055 | 49282.7 |
| 50s ribosomal protein l15 | DW935_09140 | Not Available | Negative | 2158060 - 2158506 | 15681.0 |
| 50s ribosomal protein l30 | DW935_09145 | Not Available | Negative | 2158537 - 2158713 | 6433.21 |
| 30s ribosomal protein s5 | DW935_09150 | Not Available | Negative | 2158723 - 2159241 | 17941.0 |
| 50s ribosomal protein l18 | DW935_09155 | Not Available | Negative | 2159245 - 2159586 | 12644.5 |
| 50s ribosomal protein l6 | DW935_09160 | Not Available | Negative | 2159608 - 2160177 | 20910.5 |
| 30s ribosomal protein s8 | DW935_09165 | Not Available | Negative | 2160192 - 2160587 | 14565.0 |
| 30s ribosomal protein s14 | DW935_09170 | Not Available | Negative | 2160645 - 2160944 | 11077.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

